These small batch easy zucchini muffins with chocolate chips use fresh grated zucchini, olive oil, Greek yogurt, cinnamon, nutmeg, and ginger to make six soft, spiced muffins. No need to drain the zucchini – it provides the moisture! A sprinkle of sugar before baking gives these chocolate chip zucchini muffins a bakery-style muffin top. No mixer required for this 30 minute, one bowl recipe!

a zucchini chocolate chip muffin on a white plate with a bite taken out of it, showing the bits of shredded zucchini and melty chocolate inside

If you like these zucchini chocolate chip muffins, check out my other zucchini recipes: chocolate zucchini bundt cake, zucchini cream cheese cake, and (a closely related cousin), my single layer carrot cake.

Why you’ll love this recipe

Let me start by saying, there is no need to drain or squeeze the moisture out of the grated zucchini in this recipe! The zucchini actually provides the necessary moisture for these muffins, so we’re already starting with a win. No peeling either. Just grate it and go!

Beyond that, this is basically zucchini bread in muffin form – so simple and so cozy, flavored with spices like cinnamon and nutmeg to mark the transition from summer into fall. Like my ultra popular one banana muffins, and lemon blueberry muffins, they come together quickly and easily in just one bowl with no mixer required. Plus, who doesn’t love mini chocolate chips in every bite?

a zucchini muffin on a white plate, cut in half to show the distribution of mini chocolate chips throughout the muffin

Recipe Development

I actually used my banana muffin recipe as the base when I created this zucchini muffin recipe, and in the first test I simply swapped greek yogurt in 1:1 for the banana (1/2 cup). Generally in recipes, you can replace mashed banana 1:1 with greek yogurt, pumpkin puree, or applesauce. With the added moisture of the shredded zucchini, however, the muffins were far too wet. Therefore, in subsequent testing I reduced the yogurt to only 1/4 cup, which gave the muffins the moisture, fluffiness, and slight tang I was looking for without weighing them down.

I also happily discovered that with the yogurt appropriately reduced, you do NOT need to drain the zucchini or squeeze the moisture out of it. You just need to use the medium or large holes on a box grater so the zucchini doesn’t get too watery when you’re shredding it. I also found that I liked the texture of the muffins best when I used olive oil and oat flour (they were almost fudgy in texture), but I tested it so many ways that I have several variations and substitution options for you in this recipe!

3 zucchini chocolate chip muffins stacked on top of each other against a white background

These are the best zucchini muffins because:

  • They’re super quick and easy to make (30 minutes, one bowl, no mixer — and did I mention, NO NEED to peel or drain the zucchini?)
  • Great way to use up garden zucchini (if you’re so lucky to have one, or nice friends!) and get some veggies in with your treats
  • Super soft and cozy, fragrant with spices, and taste decadent from the chocolate chips. I eat these for dessert!
  • Less sugar than the average muffin – only 1/3 cup for 6 muffins! OR, use 1/4 cup honey or maple syrup for a refined sugar free version. I love the flavor honey adds to the muffins!
  • Adaptable – many ingredient substitutions are possible depending on what you have, and can easily be made dairy-free, gluten-free, or vegan
  • Just 6 standard size muffins or 14-16 mini muffins – the perfect amount for a quick batch on a weekend morning

Ingredients

Only a few simple ingredients needed for these small batch zucchini bread muffins, and you can substitute or customize as noted below to make these your own! See the recipe card at the bottom of this post for full ingredient list and measurements.

Ingredients for the recipe arranged on a white surface: shredded zucchini, flour, olive oil, brown sugar, greek yogurt, egg, vanilla extract, cinnamon, nutmeg, ginger, mini chocolate chips
  • Half of one medium zucchini (a medium zucchini weighs about 9 ounces / 255 grams – we’ll use half or 4.5 ounces / 125 grams of it), grated on the large or medium holes of a box grater. For the recipe we’ll use 125 grams, about 1 cup of shredded zucchini if using a measuring cup.
  • Olive oil or melted butter (can substitute avocado oil, vegetable oil or melted coconut oil if you prefer; or greek yogurt for oil-free)
  • Maple syrup, honey, or brown sugar (or granulated sugar or coconut sugar)
  • 1 large egg (can substitute a flax egg: 1 tbsp ground flaxseed + 2.5 tbsp water)
  • Plain Greek yogurt (full fat or 2% recommended; plant-based greek-style yogurt will also work)
  • Vanilla extract
  • All-purpose flour (oat flour, white whole wheat flour, or gluten-free all-purpose flour all work too!)
  • Baking powder and baking soda as the leaveners
  • Salt
  • Mini chocolate chips (my preference), dark chocolate chipssemisweet chocolate chips, or chopped nuts (use what you like!)
  • A bit of extra granulated sugar or turbinado sugar, for bakery-style sparkle and crunch on your muffin tops

Equipment Needed

  • ONE mixing bowl – this is a one bowl recipe!
  • Whisk (or fork) and rubber spatula
  • Kitchen scale – I highly recommend weighing your ingredients for most accurate results, especially the flour! This is the primary way I bake these days as it is much more precise than using measuring cups (and there are fewer dishes to clean).
  • 12-cup standard muffin pan or 24-cup mini muffin pan
  • Optional: parchment paper muffin liners (I swear these are the best – they don’t stick to the muffins or muffin cups!)
  • Optional but highly effective: 1/4 cup muffin scoop or ice cream scoop

How to Make Easy Zucchini Chocolate Chip Muffins: Step by Step

Like many of my recipes, the method here is streamlined and simple. No mixer needed! See the recipe card at the bottom of this post for full instructions.

  1. Grate the zucchini using the large or medium holes of a box grater. You will have more than you need – the recipe only requires 125 grams of shredded zucchini (approximately 1 cup). You do NOT need to peel the zucchini for baking, and you do NOT need to drain it or squeeze the excess moisture out. Set aside.
  2. Whisk the wet ingredients together in a large bowl until smooth, then whisk in the leaveners and spices. Add the dry ingredients (flour) to the bowl, and fold and stir with a spatula or fork just until a batter is formed; this prevents gummy muffins. Fold in the shredded zucchini and mini chocolate chips (or nuts), if using.
  3. Optional step, for tallest muffins: let the batter sit for 15-20 minutes at room temperature while you preheat your oven to 425 degrees Fahrenheit (218 degrees Celsius). A rest to allow the baking powder to work and a high oven temperature at the beginning of the bake are both very important for tall, fluffy muffins!
  4. Spoon zucchini muffin batter into every other muffin cup in a 12-cup muffin tin (greased or in muffin/cupcake liners), sprinkle a bit of granulated sugar and extra chocolate chips on top of the muffins if desired.
  5. Bake as directed below until a cake tester or toothpick inserted in the center of the muffins comes out clean or with just a couple moist crumbs attached. Cool on a wire rack for a few minutes and enjoy!

Storage

These easy zucchini muffins can be stored as follows…

  • Room temperature: baked muffins will keep for 2-3 days in a tall airtight container that doesn’t touch the sugared tops, or individually wrap them in plastic wrap for a quick afternoon snack or breakfast on the go. These are great the next day!
  • Fridge: up to a week in an airtight container; microwave each muffin for 15-20 seconds to reheat
  • Freezer: up to 3 months, well-wrapped individually in plastic and stored in a freezer bag. Microwave for 30 seconds to reheat or allow to come to room temperature for 1-2 hours.
close up view of a finished zucchini chocolate chip muffin with grated zucchini on the side

Additions and Substitutions

Here are some options to customize the recipe and make it your own:

  • Gluten-free: substitute an equal weight (125g) of gluten-free oat flour (I LOVED the fudgy texture of these muffins with oat flour!!) or a gluten-free flour mix that contains xanthan gum. I tested and like Bob’s Red Mill Gluten Free 1:1 Baking Flour.
  • Vegan: use a flax egg (1 tbsp ground flax + 2.5 tbsp water) and make sure to use vegan chocolate chips
  • Chocolate chips: I prefer to use mini chocolate chips in this recipe for best distribution throughout the muffin, but you can sub in 1/2 cup of full size chocolate chips, chopped nuts (walnuts or pecans would be great), or skip the add-ins entirely! Recipe works either way.
  • Double the recipe for 12 muffins instead of 6!
  • Mini zucchini muffins: this recipe will make 14-16 mini muffins. Bake for 5 minutes at 425F and 5-7 more minutes at 350F (check often for doneness) — or 10-12 minutes at 375F the whole time. The mini muffins are great for kids lunchboxes – I’d recommend using mini chocolate chips here!
a zucchini muffin with chocolate chips on a plate

More Easy Muffin Recipes:

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5 from 2 votes

Easy Zucchini Muffins with Chocolate Chips

These small batch easy zucchini muffins with chocolate chips use fresh grated zucchini, olive oil, Greek yogurt, cinnamon, nutmeg, and ginger to make six soft, spiced muffins. No need to drain the zucchini – it provides the moisture! A sprinkle of sugar before baking gives these chocolate chip zucchini muffins a bakery-style muffin top. No mixer required for this 30 minute, one bowl recipe!
Prep Time15 minutes
Cook Time20 minutes
Total Time35 minutes
Course: Breakfast, Snack
Cuisine: American
Keyword: muffins, small batch, zucchini
Servings: 6 muffins
Author: Katiebird Bakes

Equipment

  • 1 12-cup standard muffin pan (or 1 24-cup mini muffin pan)
  • 1 box grater

Ingredients

  • 1 cup (125g) grated zucchini (about half of one medium 9 ounce (255g) zucchini – no need to drain before using)
  • 1/4 cup (60 ml) olive oil (or melted butter, melted coconut oil, or avocado oil)
  • 1/3 cup (66g) brown sugar (or 1/4 cup (60 ml) pure maple syrup or honey)
  • 1/4 cup (56g) plain Greek yogurt
  • 1 large egg
  • 1/2 teaspoon vanilla extract
  • 1/2 teaspoon ground cinnamon
  • 1/4 teaspoon ground nutmeg
  • 1/8 teaspoon ground ginger
  • 1/2 teaspoon baking soda
  • 1/2 teaspoon baking powder
  • 1/4 teaspoon salt
  • 1 cup (125g) all-purpose flour
  • 1/2 cup (85g) mini or semisweet chocolate chips (optional, plus extra for sprinkling on top)
  • 1 Tablespoon (12g) granulated sugar or turbinado sugar (optional, for sprinkling on top)

Instructions

  • Preheat the oven to 425°F (218°C). Line or grease every other cup of a 12-cup muffin tin (recipe makes 6 muffins; using every other cup creates better air flow and taller muffins).
  • Grate the zucchini on the large or medium holes of a box grater (do not use the small holes, as this will make the zucchini more watery). Measure out 125 grams of grated zucchini, ideally using a food scale – it's approximately 1 cup. No need to drain the zucchini or squeeze moisture out of it. Set aside and reserve any leftover zucchini for another use.
  • In a large bowl, whisk together the olive oil, maple syrup, Greek yogurt, egg, and vanilla extract until smooth.
  • Add the spices, baking soda, baking powder, and salt to the bowl with the wet and whisk until fully incorporated.
  • Add the flour to the bowl and stir together with a rubber spatula until a batter forms. Stir until just incorporated; do not overmix. Fold in the pre-measured grated zucchini and mini chocolate chips (or other add-ins, if using).
  • Optional: Let batter sit at room temperature for 15-20 minutes before scooping for tallest muffins.
  • Spoon the batter equally into the 6 muffin cups. Top each with a generous sprinkle of granulated sugar or turbinado sugar, and more mini chocolate chips if desired.
  • Bake for 5 minutes at 425°F (218°C), then decrease the oven temperature to 350°F (180°C) WITHOUT opening the oven door, and bake for 14-16 more minutes until domed and set. A toothpick inserted in the center should come out clean or with just a couple crumbs attached.
  • Let cool for a few minutes and enjoy!

Video

Notes

Storage: baked muffins keep well when covered at room temperature for 2-3 days, or in the refrigerator for up to 1 week.
Freezing: baked muffins can be frozen, well-wrapped, for up to 3 months. Set out on the counter to thaw for an hour or warm for 30 seconds in the microwave.
Different add-ins: 1/2 cup (56g) of finely chopped nuts would work well in place of the chocolate chips. Or you can bake the zucchini muffins with no chocolate chips and they’ll still be great!
Double the recipe for 12 muffins instead of 6.
Mini muffins: this recipe will make 14-16 mini muffins; bake for 5 minutes at 425 degrees F, then 5-7 more minutes at 350 degrees F (without opening the oven door). I highly recommend using mini chocolate chips since the muffins are so small.
Make gluten-free: sub an equal weight (125 grams) of oat flour (my favorite in this recipe) or an all-purpose GF flour mix with xanthan gum.
Make vegan: substitute a flax egg (1 tbsp ground flax + 2.5 tbsp water), plant-based Greek-style yogurt, and vegan chocolate chips.

Like this chocolate chip zucchini muffin recipe? Please RATE it and LEAVE A COMMENT below.  Your feedback means so much and helps other bakers too!

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4 Comments

  1. 5 stars
    Another great addition to your easy recipe collection! Traditionally, I have avoided making anything with zucchini other than vegetable or soup recipes. Just thought draining it, etc was too much of a hassle so I was very happy to find a recipe that eliminated that step. The muffins were easy to make, so tasty and the mini chocolate chips made them even better (IMO) Healthy and enjoyable–can’t ask for more than that!

  2. 5 stars
    I love zucchini bread and was super excited when I saw you post these on Instagram. these muffins are so much easier than my normal zucchini bread recipe which requires draining the water out. I was skeptical about no draining but it worked just fine and the muffins are so soft and perfectly fluffy, not wet at all! I used honey and a mix of half all purpose, half oat flour, mini chocolate chips. SO good!!